Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Gm12490-201ENSMUST00000120255 560 ntBASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Gm37497-201ENSMUST00000195830 798 ntBASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4bQ9D8B3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Chmp4bQ9D8B3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp4bQ9D8B3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp4bQ9D8B3 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Chmp4bQ9D8B3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp4bQ9D8B3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp4bQ9D8B3 Gm11803-201ENSMUST00000119966 444 ntBASIC16.27■□□□□ 0.2
Chmp4bQ9D8B3 Gm13123-201ENSMUST00000122173 492 ntBASIC16.27■□□□□ 0.2
Chmp4bQ9D8B3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.27■□□□□ 0.2
Chmp4bQ9D8B3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.27■□□□□ 0.2
Chmp4bQ9D8B3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.27■□□□□ 0.2
Chmp4bQ9D8B3 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.27■□□□□ 0.2
Chmp4bQ9D8B3 AC134254.1-201ENSMUST00000221362 167 ntBASIC16.27■□□□□ 0.2
Chmp4bQ9D8B3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp4bQ9D8B3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp4bQ9D8B3 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp4bQ9D8B3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp4bQ9D8B3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp4bQ9D8B3 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp4bQ9D8B3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Chmp4bQ9D8B3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Chmp4bQ9D8B3 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Chmp4bQ9D8B3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp4bQ9D8B3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC16.27■□□□□ 0.19
Chmp4bQ9D8B3 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp4bQ9D8B3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp4bQ9D8B3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Gm8810-201ENSMUST00000172895 754 ntBASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Gm43045-201ENSMUST00000198725 2095 ntBASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Gm3052-202ENSMUST00000188254 2224 ntBASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC16.26■□□□□ 0.19
Chmp4bQ9D8B3 Gm42748-201ENSMUST00000199354 2341 ntBASIC16.25■□□□□ 0.19
Chmp4bQ9D8B3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp4bQ9D8B3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp4bQ9D8B3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp4bQ9D8B3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp4bQ9D8B3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp4bQ9D8B3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp4bQ9D8B3 Gm8805-201ENSMUST00000117848 313 ntBASIC16.25■□□□□ 0.19
Chmp4bQ9D8B3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC16.25■□□□□ 0.19
Chmp4bQ9D8B3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC16.25■□□□□ 0.19
Chmp4bQ9D8B3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp4bQ9D8B3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms