Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Gm2420-202ENSMUST00000202224 2249 ntBASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 AC125108.1-201ENSMUST00000218986 2330 ntBASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Mrpl55Q9CZ83 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Zfp125-201ENSMUST00000079237 2488 ntBASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 BC001981-202ENSMUST00000191393 1545 ntBASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Gm15321-201ENSMUST00000121290 288 ntBASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Gm29667-201ENSMUST00000190817 490 ntBASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Gm36987-201ENSMUST00000194704 2979 ntBASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 AC122811.1-201ENSMUST00000222257 2921 ntBASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Mrpl55Q9CZ83 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 Gm42632-201ENSMUST00000201707 2411 ntBASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Mrpl55Q9CZ83 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms