Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx47Q9CWX9 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx47Q9CWX9 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx47Q9CWX9 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx47Q9CWX9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx47Q9CWX9 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx47Q9CWX9 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx47Q9CWX9 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Gm6415-201ENSMUST00000118488 348 ntBASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Gm27622-201ENSMUST00000183779 60 ntBASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Gm5161-201ENSMUST00000075243 853 ntBASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx47Q9CWX9 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx47Q9CWX9 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Ddx47Q9CWX9 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx47Q9CWX9 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.27□□□□□ -0.28
Ddx47Q9CWX9 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.27□□□□□ -0.28
Ddx47Q9CWX9 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx47Q9CWX9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Gm24158-201ENSMUST00000175263 71 ntBASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Gm43703-201ENSMUST00000200523 763 ntBASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx47Q9CWX9 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.26□□□□□ -0.29
Ddx47Q9CWX9 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ddx47Q9CWX9 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx47Q9CWX9 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx47Q9CWX9 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx47Q9CWX9 Gm23935-201ENSMUST00000102303 57 ntBASIC13.26□□□□□ -0.29
Ddx47Q9CWX9 Gm24270-201ENSMUST00000102326 57 ntBASIC13.26□□□□□ -0.29
Ddx47Q9CWX9 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx47Q9CWX9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Ddx47Q9CWX9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.26□□□□□ -0.29
Ddx47Q9CWX9 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx47Q9CWX9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx47Q9CWX9 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx47Q9CWX9 Gm24245-201ENSMUST00000157318 57 ntBASIC13.26□□□□□ -0.29
Ddx47Q9CWX9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx47Q9CWX9 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx47Q9CWX9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.26□□□□□ -0.29
Ddx47Q9CWX9 Gm29608-201ENSMUST00000190444 463 ntBASIC13.26□□□□□ -0.29
Ddx47Q9CWX9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx47Q9CWX9 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.26□□□□□ -0.29
Ddx47Q9CWX9 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms