Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cldnd1Q9CQX5 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Gm13888-201ENSMUST00000119148 422 ntBASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Gm12291-201ENSMUST00000121627 311 ntBASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Gm10179-201ENSMUST00000086233 688 ntBASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldnd1Q9CQX5 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Gm23949-201ENSMUST00000104027 127 ntBASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Gm10051-201ENSMUST00000145209 414 ntBASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Gm8194-201ENSMUST00000159783 859 ntBASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Gm28071-201ENSMUST00000190355 478 ntBASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Gm19931-201ENSMUST00000198920 368 ntBASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 AY036118-201ENSMUST00000200021 923 ntBASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Gm19187-201ENSMUST00000206781 892 ntBASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cldnd1Q9CQX5 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Cldnd1Q9CQX5 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.31
Cldnd1Q9CQX5 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cldnd1Q9CQX5 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms