Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Gm6458-201ENSMUST00000211573 635 ntBASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.59□□□□□ -0.71
H2afb1Q9CQ70 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Gm45668-201ENSMUST00000211271 493 ntBASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb1Q9CQ70 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb1Q9CQ70 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.57□□□□□ -0.72
H2afb1Q9CQ70 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.57□□□□□ -0.72
H2afb1Q9CQ70 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb1Q9CQ70 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb1Q9CQ70 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.57□□□□□ -0.72
H2afb1Q9CQ70 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb1Q9CQ70 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb1Q9CQ70 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb1Q9CQ70 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
H2afb1Q9CQ70 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms