Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim33Q99PP7 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim33Q99PP7 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Proscos-202ENSMUST00000178990 666 ntBASIC12.88□□□□□ -0.35
Trim33Q99PP7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.88□□□□□ -0.35
Trim33Q99PP7 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.88□□□□□ -0.35
Trim33Q99PP7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.88□□□□□ -0.35
Trim33Q99PP7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim33Q99PP7 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.87□□□□□ -0.35
Trim33Q99PP7 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Mir874-201ENSMUST00000104769 76 ntBASIC12.87□□□□□ -0.35
Trim33Q99PP7 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Gm11803-201ENSMUST00000119966 444 ntBASIC12.87□□□□□ -0.35
Trim33Q99PP7 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.87□□□□□ -0.35
Trim33Q99PP7 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Gm27839-201ENSMUST00000184242 106 ntBASIC12.87□□□□□ -0.35
Trim33Q99PP7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.87□□□□□ -0.35
Trim33Q99PP7 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trim33Q99PP7 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.87□□□□□ -0.35
Trim33Q99PP7 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim33Q99PP7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim33Q99PP7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim33Q99PP7 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trim33Q99PP7 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim33Q99PP7 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim33Q99PP7 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim33Q99PP7 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim33Q99PP7 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim33Q99PP7 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim33Q99PP7 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim33Q99PP7 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim33Q99PP7 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim33Q99PP7 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim33Q99PP7 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim33Q99PP7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim33Q99PP7 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim33Q99PP7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim33Q99PP7 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim33Q99PP7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim33Q99PP7 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.86□□□□□ -0.35
Trim33Q99PP7 Gm11814-201ENSMUST00000119515 929 ntBASIC12.86□□□□□ -0.35
Trim33Q99PP7 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms