Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Gm11989-201ENSMUST00000117240 672 ntBASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Gm11362-201ENSMUST00000118838 850 ntBASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Gm6905-201ENSMUST00000205729 511 ntBASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh23Q99PF4 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Gm15744-201ENSMUST00000161734 213 ntBASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.79□□□□□ -0.36
Cdh23Q99PF4 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.79□□□□□ -0.36
Cdh23Q99PF4 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Gm807-202ENSMUST00000224929 408 ntBASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Gm13916-201ENSMUST00000117368 628 ntBASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cdh23Q99PF4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Gm4157-201ENSMUST00000211647 679 ntBASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Gm15352-201ENSMUST00000118696 270 ntBASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Gm4654-201ENSMUST00000183305 982 ntBASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Gm45856-201ENSMUST00000212752 416 ntBASIC12.78□□□□□ -0.36
Cdh23Q99PF4 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh23Q99PF4 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Cdh23Q99PF4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh23Q99PF4 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh23Q99PF4 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh23Q99PF4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh23Q99PF4 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh23Q99PF4 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh23Q99PF4 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh23Q99PF4 Gm27910-201ENSMUST00000185004 107 ntBASIC12.77□□□□□ -0.36
Cdh23Q99PF4 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh23Q99PF4 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Cdh23Q99PF4 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh23Q99PF4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh23Q99PF4 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh23Q99PF4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh23Q99PF4 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh23Q99PF4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh23Q99PF4 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms