Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Msh4Q99MT2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msh4Q99MT2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msh4Q99MT2 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Msh4Q99MT2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msh4Q99MT2 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msh4Q99MT2 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Msh4Q99MT2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msh4Q99MT2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msh4Q99MT2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.61□□□□□ -0.39
Msh4Q99MT2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.61□□□□□ -0.39
Msh4Q99MT2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msh4Q99MT2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Msh4Q99MT2 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msh4Q99MT2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Gm11425-201ENSMUST00000119608 498 ntBASIC12.6□□□□□ -0.39
Msh4Q99MT2 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Proscos-202ENSMUST00000178990 666 ntBASIC12.6□□□□□ -0.39
Msh4Q99MT2 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Gm9396-201ENSMUST00000076703 567 ntBASIC12.6□□□□□ -0.39
Msh4Q99MT2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Msh4Q99MT2 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.59□□□□□ -0.39
Msh4Q99MT2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Msh4Q99MT2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.59□□□□□ -0.39
Msh4Q99MT2 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.59□□□□□ -0.39
Msh4Q99MT2 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.59□□□□□ -0.39
Msh4Q99MT2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.59□□□□□ -0.39
Msh4Q99MT2 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Msh4Q99MT2 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms