Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf111Q99ML9 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf111Q99ML9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf111Q99ML9 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf111Q99ML9 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rnf111Q99ML9 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf111Q99ML9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf111Q99ML9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rnf111Q99ML9 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf111Q99ML9 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf111Q99ML9 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Rnf111Q99ML9 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf111Q99ML9 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rnf111Q99ML9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Rnf111Q99ML9 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Paupar-201ENSMUST00000194826 3482 ntBASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Gm12091-201ENSMUST00000146791 830 ntBASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf111Q99ML9 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Gm23984-201ENSMUST00000157139 203 ntBASIC12.53□□□□□ -0.4
Rnf111Q99ML9 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Gm18018-201ENSMUST00000198273 408 ntBASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf111Q99ML9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms