Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx6-1Q99MA9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx6-1Q99MA9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Daam2-202ENSMUST00000224595 1926 ntBASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Gm13996-201ENSMUST00000118456 430 ntBASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Gm14704-201ENSMUST00000120300 874 ntBASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Gm25043-201ENSMUST00000158604 212 ntBASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx6-1Q99MA9 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nkx6-1Q99MA9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms