Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Gm12091-201ENSMUST00000146791 830 ntBASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Gm27701-201ENSMUST00000184498 110 ntBASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdhga3Q91XY5 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms