Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SfpqQ8VIJ6 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SfpqQ8VIJ6 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SfpqQ8VIJ6 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SfpqQ8VIJ6 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SfpqQ8VIJ6 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SfpqQ8VIJ6 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SfpqQ8VIJ6 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SfpqQ8VIJ6 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.64□□□□□ -0.23
SfpqQ8VIJ6 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.64□□□□□ -0.23
SfpqQ8VIJ6 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Gm38223-201ENSMUST00000194484 695 ntBASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.63□□□□□ -0.23
SfpqQ8VIJ6 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SfpqQ8VIJ6 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SfpqQ8VIJ6 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.61□□□□□ -0.23
SfpqQ8VIJ6 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.61□□□□□ -0.23
SfpqQ8VIJ6 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.61□□□□□ -0.23
SfpqQ8VIJ6 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SfpqQ8VIJ6 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SfpqQ8VIJ6 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SfpqQ8VIJ6 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SfpqQ8VIJ6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SfpqQ8VIJ6 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms