Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm13813-201ENSMUST00000120998 787 ntBASIC13.78□□□□□ -0.2
TraipQ8VIG6 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Gm27243-201ENSMUST00000183964 521 ntBASIC13.78□□□□□ -0.2
TraipQ8VIG6 Gm18558-201ENSMUST00000186253 1214 ntBASIC13.78□□□□□ -0.2
TraipQ8VIG6 Gm38241-201ENSMUST00000192641 898 ntBASIC13.78□□□□□ -0.2
TraipQ8VIG6 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.78□□□□□ -0.2
TraipQ8VIG6 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.78□□□□□ -0.2
TraipQ8VIG6 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TraipQ8VIG6 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TraipQ8VIG6 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.77□□□□□ -0.2
TraipQ8VIG6 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
TraipQ8VIG6 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TraipQ8VIG6 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TraipQ8VIG6 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TraipQ8VIG6 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.77□□□□□ -0.21
TraipQ8VIG6 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Gm26956-201ENSMUST00000182176 986 ntBASIC13.77□□□□□ -0.21
TraipQ8VIG6 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.77□□□□□ -0.21
TraipQ8VIG6 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.77□□□□□ -0.21
TraipQ8VIG6 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.77□□□□□ -0.21
TraipQ8VIG6 Gm5950-201ENSMUST00000213337 772 ntBASIC13.77□□□□□ -0.21
TraipQ8VIG6 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.77□□□□□ -0.21
TraipQ8VIG6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TraipQ8VIG6 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.76□□□□□ -0.21
TraipQ8VIG6 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TraipQ8VIG6 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.76□□□□□ -0.21
TraipQ8VIG6 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Mir877-201ENSMUST00000104738 85 ntBASIC13.76□□□□□ -0.21
TraipQ8VIG6 Gm13899-201ENSMUST00000121519 1255 ntBASIC13.76□□□□□ -0.21
TraipQ8VIG6 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Gm28941-201ENSMUST00000185536 1017 ntBASIC13.76□□□□□ -0.21
TraipQ8VIG6 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms