Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.37□□□□□ -0.27
Trim60Q8VI40 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Gm20949-201ENSMUST00000206478 952 ntBASIC13.37□□□□□ -0.27
Trim60Q8VI40 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim60Q8VI40 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.37□□□□□ -0.27
Trim60Q8VI40 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim60Q8VI40 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim60Q8VI40 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim60Q8VI40 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim60Q8VI40 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim60Q8VI40 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim60Q8VI40 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim60Q8VI40 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim60Q8VI40 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.36□□□□□ -0.27
Trim60Q8VI40 Gm5687-201ENSMUST00000118252 640 ntBASIC13.36□□□□□ -0.27
Trim60Q8VI40 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.36□□□□□ -0.27
Trim60Q8VI40 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
Trim60Q8VI40 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim60Q8VI40 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim60Q8VI40 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim60Q8VI40 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.36□□□□□ -0.27
Trim60Q8VI40 Gm6458-201ENSMUST00000211573 635 ntBASIC13.36□□□□□ -0.27
Trim60Q8VI40 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim60Q8VI40 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim60Q8VI40 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim60Q8VI40 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim60Q8VI40 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim60Q8VI40 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim60Q8VI40 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim60Q8VI40 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim60Q8VI40 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim60Q8VI40 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim60Q8VI40 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.35□□□□□ -0.27
Trim60Q8VI40 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Mir686-201ENSMUST00000102174 109 ntBASIC13.35□□□□□ -0.27
Trim60Q8VI40 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Gm12341-201ENSMUST00000119724 503 ntBASIC13.35□□□□□ -0.27
Trim60Q8VI40 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Gm28631-201ENSMUST00000190740 334 ntBASIC13.35□□□□□ -0.27
Trim60Q8VI40 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim60Q8VI40 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.35□□□□□ -0.27
Trim60Q8VI40 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim60Q8VI40 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.34□□□□□ -0.27
Trim60Q8VI40 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms