Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Mir6420-201ENSMUST00000185032 102 ntBASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Gm37497-201ENSMUST00000195830 798 ntBASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Gm10146-201ENSMUST00000072739 309 ntBASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Retreg1dQ8VE91 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Retreg1dQ8VE91 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Retreg1dQ8VE91 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Retreg1dQ8VE91 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Retreg1dQ8VE91 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Gm16202-201ENSMUST00000117532 544 ntBASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Gm27514-201ENSMUST00000183692 110 ntBASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.83□□□□□ -0.36
Retreg1dQ8VE91 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.82□□□□□ -0.36
Retreg1dQ8VE91 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Retreg1dQ8VE91 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.82□□□□□ -0.36
Retreg1dQ8VE91 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Retreg1dQ8VE91 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg1dQ8VE91 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg1dQ8VE91 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg1dQ8VE91 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms