Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ndc1Q8VCB1 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Gm28693-202ENSMUST00000190758 331 ntBASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Gm43133-201ENSMUST00000197472 463 ntBASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ndc1Q8VCB1 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ndc1Q8VCB1 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ndc1Q8VCB1 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ndc1Q8VCB1 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.21□□□□□ -0.46
Ndc1Q8VCB1 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ndc1Q8VCB1 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ndc1Q8VCB1 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ndc1Q8VCB1 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ndc1Q8VCB1 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ndc1Q8VCB1 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ndc1Q8VCB1 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ndc1Q8VCB1 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ndc1Q8VCB1 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ndc1Q8VCB1 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ndc1Q8VCB1 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Gm6222-202ENSMUST00000182143 629 ntBASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Gm42627-201ENSMUST00000197347 224 ntBASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Gm43118-201ENSMUST00000199149 775 ntBASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Gm6458-201ENSMUST00000211573 635 ntBASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ndc1Q8VCB1 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms