Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC16.49■□□□□ 0.23
Chmp7Q8R1T1 Gm43289-201ENSMUST00000200537 1475 ntBASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 AC155298.2-201ENSMUST00000225485 6226 ntBASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Gm26361-201ENSMUST00000158868 186 ntBASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp7Q8R1T1 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Gm8018-201ENSMUST00000173536 789 ntBASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Gm27023-201ENSMUST00000182372 285 ntBASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Gm2673-201ENSMUST00000120958 1608 ntBASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Gm4864-201ENSMUST00000219894 1461 ntBASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp7Q8R1T1 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Gm5846-201ENSMUST00000193146 1414 ntBASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Gm4760-201ENSMUST00000119663 1030 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms