Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf4Q8K4J2 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Mir1897-201ENSMUST00000122581 272 ntBASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Rprl2-201ENSMUST00000157150 290 ntBASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Gm9824-201ENSMUST00000178707 561 ntBASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf4Q8K4J2 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Gm24543-201ENSMUST00000103867 82 ntBASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Gm15467-201ENSMUST00000120582 445 ntBASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Gm7063-201ENSMUST00000186840 981 ntBASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Gm2213-201ENSMUST00000197485 688 ntBASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms