Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.57□□□□□ -0.08
Syne4Q8CII8 Mir874-201ENSMUST00000104769 76 ntBASIC14.57□□□□□ -0.08
Syne4Q8CII8 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Gm12015-201ENSMUST00000117065 843 ntBASIC14.57□□□□□ -0.08
Syne4Q8CII8 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.57□□□□□ -0.08
Syne4Q8CII8 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Syne4Q8CII8 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Syne4Q8CII8 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Gm18734-201ENSMUST00000172937 808 ntBASIC14.56□□□□□ -0.08
Syne4Q8CII8 Gm28882-201ENSMUST00000185504 314 ntBASIC14.56□□□□□ -0.08
Syne4Q8CII8 Gm37666-201ENSMUST00000194110 866 ntBASIC14.56□□□□□ -0.08
Syne4Q8CII8 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.56□□□□□ -0.08
Syne4Q8CII8 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.56□□□□□ -0.08
Syne4Q8CII8 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Syne4Q8CII8 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Syne4Q8CII8 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Syne4Q8CII8 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Syne4Q8CII8 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.55□□□□□ -0.08
Syne4Q8CII8 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Syne4Q8CII8 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.55□□□□□ -0.08
Syne4Q8CII8 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Syne4Q8CII8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Syne4Q8CII8 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.55□□□□□ -0.08
Syne4Q8CII8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Syne4Q8CII8 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Syne4Q8CII8 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.55□□□□□ -0.08
Syne4Q8CII8 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Syne4Q8CII8 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.55□□□□□ -0.08
Syne4Q8CII8 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Syne4Q8CII8 Gm16296-201ENSMUST00000159905 325 ntBASIC14.55□□□□□ -0.08
Syne4Q8CII8 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Syne4Q8CII8 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.55□□□□□ -0.08
Syne4Q8CII8 Gm29615-201ENSMUST00000185371 697 ntBASIC14.55□□□□□ -0.08
Syne4Q8CII8 Gm28224-201ENSMUST00000186078 697 ntBASIC14.55□□□□□ -0.08
Syne4Q8CII8 Gm29001-201ENSMUST00000186177 697 ntBASIC14.55□□□□□ -0.08
Syne4Q8CII8 Gm28292-201ENSMUST00000186593 697 ntBASIC14.55□□□□□ -0.08
Syne4Q8CII8 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.55□□□□□ -0.08
Syne4Q8CII8 Gm28101-201ENSMUST00000187608 697 ntBASIC14.55□□□□□ -0.08
Syne4Q8CII8 Gm29076-201ENSMUST00000187689 697 ntBASIC14.55□□□□□ -0.08
Syne4Q8CII8 Gm28302-201ENSMUST00000187931 697 ntBASIC14.55□□□□□ -0.08
Syne4Q8CII8 Gm28646-201ENSMUST00000188220 697 ntBASIC14.55□□□□□ -0.08
Syne4Q8CII8 Gm28205-201ENSMUST00000189177 697 ntBASIC14.55□□□□□ -0.08
Syne4Q8CII8 Gm29032-201ENSMUST00000189797 697 ntBASIC14.55□□□□□ -0.08
Syne4Q8CII8 Gm28695-201ENSMUST00000190300 697 ntBASIC14.55□□□□□ -0.08
Syne4Q8CII8 Gm37448-201ENSMUST00000192795 697 ntBASIC14.55□□□□□ -0.08
Syne4Q8CII8 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.55□□□□□ -0.08
Syne4Q8CII8 Gm45598-202ENSMUST00000210719 986 ntBASIC14.55□□□□□ -0.08
Syne4Q8CII8 Gm45770-201ENSMUST00000212105 616 ntBASIC14.55□□□□□ -0.08
Syne4Q8CII8 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.55□□□□□ -0.08
Syne4Q8CII8 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.55□□□□□ -0.08
Syne4Q8CII8 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Syne4Q8CII8 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Syne4Q8CII8 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Syne4Q8CII8 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Syne4Q8CII8 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms