Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc28bQ8CEG5 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Gm27390-201ENSMUST00000184516 176 ntBASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc28bQ8CEG5 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc28bQ8CEG5 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc28bQ8CEG5 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc28bQ8CEG5 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.77□□□□□ -0.36
Ccdc28bQ8CEG5 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc28bQ8CEG5 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc28bQ8CEG5 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc28bQ8CEG5 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc28bQ8CEG5 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc28bQ8CEG5 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc28bQ8CEG5 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.77□□□□□ -0.36
Ccdc28bQ8CEG5 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.77□□□□□ -0.36
Ccdc28bQ8CEG5 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc28bQ8CEG5 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc28bQ8CEG5 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc28bQ8CEG5 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc28bQ8CEG5 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Gm27680-201ENSMUST00000184192 160 ntBASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Gm44344-201ENSMUST00000200287 129 ntBASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc28bQ8CEG5 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms