Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Gm17150-201ENSMUST00000165577 381 ntBASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Itm2b-204ENSMUST00000228637 783 ntBASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcpip1Q8CDG3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Vcpip1Q8CDG3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Gm15806-201ENSMUST00000120696 955 ntBASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Gm15429-201ENSMUST00000151268 798 ntBASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.89□□□□□ -0.19
Vcpip1Q8CDG3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcpip1Q8CDG3 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcpip1Q8CDG3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcpip1Q8CDG3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcpip1Q8CDG3 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcpip1Q8CDG3 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.88□□□□□ -0.19
Vcpip1Q8CDG3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcpip1Q8CDG3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.88□□□□□ -0.19
Vcpip1Q8CDG3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.88□□□□□ -0.19
Vcpip1Q8CDG3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.88□□□□□ -0.19
Vcpip1Q8CDG3 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.88□□□□□ -0.19
Vcpip1Q8CDG3 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.88□□□□□ -0.19
Vcpip1Q8CDG3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcpip1Q8CDG3 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.88□□□□□ -0.19
Vcpip1Q8CDG3 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.88□□□□□ -0.19
Vcpip1Q8CDG3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 190.6 ms