Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.07■□□□□ 0
Vps53Q8CCB4 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Vps53Q8CCB4 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.07■□□□□ 0
Vps53Q8CCB4 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps53Q8CCB4 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Vps53Q8CCB4 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps53Q8CCB4 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps53Q8CCB4 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps53Q8CCB4 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps53Q8CCB4 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.06■□□□□ 0
Vps53Q8CCB4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.06■□□□□ 0
Vps53Q8CCB4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps53Q8CCB4 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Vps53Q8CCB4 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Vps53Q8CCB4 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps53Q8CCB4 Gm10156-201ENSMUST00000122364 462 ntBASIC15.06■□□□□ 0
Vps53Q8CCB4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Vps53Q8CCB4 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.06■□□□□ 0
Vps53Q8CCB4 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Vps53Q8CCB4 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.06■□□□□ 0
Vps53Q8CCB4 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.06■□□□□ 0
Vps53Q8CCB4 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Vps53Q8CCB4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps53Q8CCB4 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.06■□□□□ 0
Vps53Q8CCB4 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps53Q8CCB4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Vps53Q8CCB4 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps53Q8CCB4 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps53Q8CCB4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps53Q8CCB4 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Vps53Q8CCB4 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps53Q8CCB4 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps53Q8CCB4 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps53Q8CCB4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps53Q8CCB4 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vps53Q8CCB4 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps53Q8CCB4 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Vps53Q8CCB4 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.05■□□□□ 0
Vps53Q8CCB4 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps53Q8CCB4 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps53Q8CCB4 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC15.05■□□□□ 0
Vps53Q8CCB4 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps53Q8CCB4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.05■□□□□ -0
Vps53Q8CCB4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Vps53Q8CCB4 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Vps53Q8CCB4 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps53Q8CCB4 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps53Q8CCB4 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.05■□□□□ -0
Vps53Q8CCB4 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps53Q8CCB4 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps53Q8CCB4 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.05■□□□□ -0
Vps53Q8CCB4 Proscos-202ENSMUST00000178990 666 ntBASIC15.05■□□□□ -0
Vps53Q8CCB4 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.05■□□□□ -0
Vps53Q8CCB4 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.05■□□□□ -0
Vps53Q8CCB4 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.05■□□□□ -0
Vps53Q8CCB4 Gm19309-201ENSMUST00000218295 205 ntBASIC15.05■□□□□ -0
Vps53Q8CCB4 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.05■□□□□ -0
Vps53Q8CCB4 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps53Q8CCB4 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.05■□□□□ -0
Vps53Q8CCB4 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Vps53Q8CCB4 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps53Q8CCB4 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Vps53Q8CCB4 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps53Q8CCB4 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps53Q8CCB4 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps53Q8CCB4 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Vps53Q8CCB4 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.05■□□□□ -0
Vps53Q8CCB4 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.05■□□□□ -0
Vps53Q8CCB4 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps53Q8CCB4 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Vps53Q8CCB4 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.05■□□□□ -0
Vps53Q8CCB4 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Vps53Q8CCB4 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Vps53Q8CCB4 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps53Q8CCB4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Vps53Q8CCB4 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps53Q8CCB4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps53Q8CCB4 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps53Q8CCB4 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps53Q8CCB4 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps53Q8CCB4 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps53Q8CCB4 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps53Q8CCB4 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.04■□□□□ -0
Vps53Q8CCB4 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.04■□□□□ -0
Vps53Q8CCB4 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps53Q8CCB4 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps53Q8CCB4 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps53Q8CCB4 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps53Q8CCB4 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps53Q8CCB4 Gm14723-201ENSMUST00000118686 215 ntBASIC15.04■□□□□ -0
Vps53Q8CCB4 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.04■□□□□ -0
Vps53Q8CCB4 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps53Q8CCB4 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.04■□□□□ -0
Vps53Q8CCB4 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.04■□□□□ -0
Vps53Q8CCB4 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms