Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Gm15376-201ENSMUST00000122258 783 ntBASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Gm28631-201ENSMUST00000190740 334 ntBASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.97□□□□□ -0.65
Rnf170Q8CBG9 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Gm5866-201ENSMUST00000177881 973 ntBASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Mir7221-201ENSMUST00000184009 72 ntBASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf170Q8CBG9 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf170Q8CBG9 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf170Q8CBG9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf170Q8CBG9 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Rnf170Q8CBG9 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf170Q8CBG9 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf170Q8CBG9 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf170Q8CBG9 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf170Q8CBG9 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf170Q8CBG9 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf170Q8CBG9 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf170Q8CBG9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf170Q8CBG9 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf170Q8CBG9 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf170Q8CBG9 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf170Q8CBG9 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Rnf170Q8CBG9 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.96□□□□□ -0.66
Rnf170Q8CBG9 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf170Q8CBG9 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Rnf170Q8CBG9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf170Q8CBG9 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf170Q8CBG9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf170Q8CBG9 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf170Q8CBG9 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf170Q8CBG9 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf170Q8CBG9 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf170Q8CBG9 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf170Q8CBG9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.95□□□□□ -0.66
Rnf170Q8CBG9 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf170Q8CBG9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.95□□□□□ -0.66
Rnf170Q8CBG9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf170Q8CBG9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Rnf170Q8CBG9 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf170Q8CBG9 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.95□□□□□ -0.66
Rnf170Q8CBG9 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.95□□□□□ -0.66
Rnf170Q8CBG9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms