Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Uba3Q8C878 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Uba3Q8C878 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Uba3Q8C878 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Uba3Q8C878 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Uba3Q8C878 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.61□□□□□ -0.23
Uba3Q8C878 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Uba3Q8C878 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Uba3Q8C878 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Uba3Q8C878 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Uba3Q8C878 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Uba3Q8C878 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Uba3Q8C878 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Uba3Q8C878 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Uba3Q8C878 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.61□□□□□ -0.23
Uba3Q8C878 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Uba3Q8C878 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Uba3Q8C878 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Uba3Q8C878 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Uba3Q8C878 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Uba3Q8C878 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.61□□□□□ -0.23
Uba3Q8C878 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Uba3Q8C878 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Uba3Q8C878 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Uba3Q8C878 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Uba3Q8C878 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Uba3Q8C878 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Uba3Q8C878 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.6□□□□□ -0.23
Uba3Q8C878 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.6□□□□□ -0.23
Uba3Q8C878 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Uba3Q8C878 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Uba3Q8C878 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Uba3Q8C878 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Uba3Q8C878 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Uba3Q8C878 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Uba3Q8C878 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Uba3Q8C878 Gm14704-201ENSMUST00000120300 874 ntBASIC13.6□□□□□ -0.23
Uba3Q8C878 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.6□□□□□ -0.23
Uba3Q8C878 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Uba3Q8C878 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.6□□□□□ -0.23
Uba3Q8C878 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.6□□□□□ -0.23
Uba3Q8C878 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Uba3Q8C878 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Uba3Q8C878 Gm26927-201ENSMUST00000182385 965 ntBASIC13.6□□□□□ -0.23
Uba3Q8C878 Mir7085-201ENSMUST00000184353 66 ntBASIC13.6□□□□□ -0.23
Uba3Q8C878 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.6□□□□□ -0.23
Uba3Q8C878 Gm18062-201ENSMUST00000208020 547 ntBASIC13.6□□□□□ -0.23
Uba3Q8C878 Gm18055-201ENSMUST00000208254 547 ntBASIC13.6□□□□□ -0.23
Uba3Q8C878 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Uba3Q8C878 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.6□□□□□ -0.23
Uba3Q8C878 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Uba3Q8C878 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Uba3Q8C878 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Uba3Q8C878 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Uba3Q8C878 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Uba3Q8C878 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Uba3Q8C878 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Uba3Q8C878 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Uba3Q8C878 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.6□□□□□ -0.23
Uba3Q8C878 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Uba3Q8C878 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Uba3Q8C878 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Uba3Q8C878 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Uba3Q8C878 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.59□□□□□ -0.23
Uba3Q8C878 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.59□□□□□ -0.23
Uba3Q8C878 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.59□□□□□ -0.23
Uba3Q8C878 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.59□□□□□ -0.23
Uba3Q8C878 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.59□□□□□ -0.23
Uba3Q8C878 Gm4768-201ENSMUST00000206199 686 ntBASIC13.59□□□□□ -0.23
Uba3Q8C878 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.59□□□□□ -0.23
Uba3Q8C878 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.59□□□□□ -0.23
Uba3Q8C878 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.59□□□□□ -0.23
Uba3Q8C878 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Uba3Q8C878 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Uba3Q8C878 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Uba3Q8C878 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms