Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 AC022775.2-201ENSMUST00000227885 646 ntBASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc60Q8C4J0 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Gm8617-201ENSMUST00000118796 2222 ntBASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Gm18916-201ENSMUST00000198264 1246 ntBASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 AC138604.1-201ENSMUST00000226969 739 ntBASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Gm15897-201ENSMUST00000117770 1486 ntBASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc60Q8C4J0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ccdc60Q8C4J0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Gm43416-201ENSMUST00000201916 1015 ntBASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc60Q8C4J0 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Gm23931-201ENSMUST00000103842 109 ntBASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Gm6222-202ENSMUST00000182143 629 ntBASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Gm44772-201ENSMUST00000207623 1191 ntBASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Mir339-201ENSMUST00000083659 96 ntBASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms