Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps9d1Q8C190 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps9d1Q8C190 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps9d1Q8C190 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.13□□□□□ -0.47
Vps9d1Q8C190 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps9d1Q8C190 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps9d1Q8C190 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Vps9d1Q8C190 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps9d1Q8C190 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vps9d1Q8C190 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps9d1Q8C190 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps9d1Q8C190 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps9d1Q8C190 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps9d1Q8C190 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Gm21854-201ENSMUST00000179901 471 ntBASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Gm38144-201ENSMUST00000192790 465 ntBASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Gm43094-201ENSMUST00000196549 921 ntBASIC12.12□□□□□ -0.47
Vps9d1Q8C190 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps9d1Q8C190 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Gm12490-201ENSMUST00000120255 560 ntBASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Vps9d1Q8C190 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms