Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 AY702102-202ENSMUST00000194651 1173 ntBASIC11.52□□□□□ -0.57
Ube3dQ8BX13 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.52□□□□□ -0.57
Ube3dQ8BX13 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Gm7561-201ENSMUST00000211203 886 ntBASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ube3dQ8BX13 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Gm29649-201ENSMUST00000185649 419 ntBASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ube3dQ8BX13 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Gm12403-201ENSMUST00000121384 959 ntBASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ube3dQ8BX13 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms