Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rd3Q8BRE0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Gm24830-201ENSMUST00000102024 166 ntBASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Gm23270-201ENSMUST00000104055 131 ntBASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Gm11531-201ENSMUST00000117614 555 ntBASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Gm25890-201ENSMUST00000177643 165 ntBASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Gm22614-201ENSMUST00000178300 165 ntBASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Gm18753-201ENSMUST00000201000 566 ntBASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Gm22042-201ENSMUST00000082989 165 ntBASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Gm26232-201ENSMUST00000083360 166 ntBASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Gm24136-201ENSMUST00000083374 165 ntBASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Gm26110-201ENSMUST00000083971 165 ntBASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rd3Q8BRE0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Mir874-201ENSMUST00000104769 76 ntBASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.67□□□□□ -0.22
Rd3Q8BRE0 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Gm22058-201ENSMUST00000083393 310 ntBASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms