Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm13612-201ENSMUST00000119276 390 ntBASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Gm13829-201ENSMUST00000119600 138 ntBASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Gm8598-201ENSMUST00000221184 836 ntBASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Gm26315-201ENSMUST00000083890 321 ntBASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Gm38144-201ENSMUST00000192790 465 ntBASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Gm38671-201ENSMUST00000200573 130 ntBASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Gm6266-201ENSMUST00000203844 806 ntBASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Gm17794-201ENSMUST00000220252 955 ntBASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Gm10012-201ENSMUST00000078252 192 ntBASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Gm25857-201ENSMUST00000082788 129 ntBASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4Q8BQZ5 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms