Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC18.03■□□□□ 0.48
Usp54Q8BL06 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC18.03■□□□□ 0.48
Usp54Q8BL06 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp54Q8BL06 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC18.03■□□□□ 0.48
Usp54Q8BL06 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp54Q8BL06 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp54Q8BL06 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp54Q8BL06 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC18.03■□□□□ 0.48
Usp54Q8BL06 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp54Q8BL06 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp54Q8BL06 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp54Q8BL06 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp54Q8BL06 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC18.02■□□□□ 0.48
Usp54Q8BL06 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Usp54Q8BL06 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp54Q8BL06 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp54Q8BL06 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Usp54Q8BL06 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp54Q8BL06 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp54Q8BL06 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp54Q8BL06 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Usp54Q8BL06 Gm28719-201ENSMUST00000187779 1757 ntBASIC18.02■□□□□ 0.48
Usp54Q8BL06 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Usp54Q8BL06 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC18.02■□□□□ 0.48
Usp54Q8BL06 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Usp54Q8BL06 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Usp54Q8BL06 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Usp54Q8BL06 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Usp54Q8BL06 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Usp54Q8BL06 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Usp54Q8BL06 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Usp54Q8BL06 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Usp54Q8BL06 Gm43045-201ENSMUST00000198725 2095 ntBASIC18.02■□□□□ 0.47
Usp54Q8BL06 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Usp54Q8BL06 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Usp54Q8BL06 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Usp54Q8BL06 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Usp54Q8BL06 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC18.02■□□□□ 0.47
Usp54Q8BL06 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Usp54Q8BL06 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Usp54Q8BL06 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp54Q8BL06 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC18.01■□□□□ 0.47
Usp54Q8BL06 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Usp54Q8BL06 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp54Q8BL06 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC18.01■□□□□ 0.47
Usp54Q8BL06 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Gm807-202ENSMUST00000224929 408 ntBASIC18.01■□□□□ 0.47
Usp54Q8BL06 AC140293.1-201ENSMUST00000225626 1247 ntBASIC18.01■□□□□ 0.47
Usp54Q8BL06 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Usp54Q8BL06 Gm44851-201ENSMUST00000205735 2309 ntBASIC18.01■□□□□ 0.47
Usp54Q8BL06 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC18■□□□□ 0.47
Usp54Q8BL06 Gm12029-201ENSMUST00000120073 832 ntBASIC18■□□□□ 0.47
Usp54Q8BL06 Gm14760-201ENSMUST00000121831 999 ntBASIC18■□□□□ 0.47
Usp54Q8BL06 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC18■□□□□ 0.47
Usp54Q8BL06 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Usp54Q8BL06 AC129219.2-201ENSMUST00000224324 701 ntBASIC18■□□□□ 0.47
Usp54Q8BL06 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp54Q8BL06 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC18■□□□□ 0.47
Usp54Q8BL06 Gm9785-201ENSMUST00000062642 1006 ntBASIC18■□□□□ 0.47
Usp54Q8BL06 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC18■□□□□ 0.47
Usp54Q8BL06 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Usp54Q8BL06 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp54Q8BL06 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Usp54Q8BL06 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC18■□□□□ 0.47
Usp54Q8BL06 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Usp54Q8BL06 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Usp54Q8BL06 Gm5939-201ENSMUST00000119613 2874 ntBASIC18■□□□□ 0.47
Usp54Q8BL06 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC18■□□□□ 0.47
Usp54Q8BL06 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp54Q8BL06 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Usp54Q8BL06 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Usp54Q8BL06 Gm15595-201ENSMUST00000120840 961 ntBASIC18■□□□□ 0.47
Usp54Q8BL06 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC18■□□□□ 0.47
Usp54Q8BL06 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC18■□□□□ 0.47
Usp54Q8BL06 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC18■□□□□ 0.47
Usp54Q8BL06 Gm37246-201ENSMUST00000192665 835 ntBASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms