Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC15.16■□□□□ 0.02
Samm50Q8BGH2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Gm15824-201ENSMUST00000119516 955 ntBASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Gm12403-201ENSMUST00000121384 959 ntBASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Gm27486-201ENSMUST00000184923 80 ntBASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Gm7287-201ENSMUST00000205267 602 ntBASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Samm50Q8BGH2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Samm50Q8BGH2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Samm50Q8BGH2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Samm50Q8BGH2 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Samm50Q8BGH2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Samm50Q8BGH2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.13■□□□□ 0.01
Samm50Q8BGH2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Samm50Q8BGH2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Samm50Q8BGH2 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Samm50Q8BGH2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Samm50Q8BGH2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Samm50Q8BGH2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Samm50Q8BGH2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Samm50Q8BGH2 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Samm50Q8BGH2 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Samm50Q8BGH2 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms