Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Gm18038-201ENSMUST00000197900 485 ntBASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trnp1Q80ZI1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Gm14460-201ENSMUST00000121511 639 ntBASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Gm21811-201ENSMUST00000096485 930 ntBASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trnp1Q80ZI1 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Gm42937-201ENSMUST00000197360 752 ntBASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trnp1Q80ZI1 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Gm8365-201ENSMUST00000197334 648 ntBASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Gm1821-202ENSMUST00000227415 750 ntBASIC14.42□□□□□ -0.1
Trnp1Q80ZI1 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms