Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shank2Q80Z38 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC16.38■□□□□ 0.21
Shank2Q80Z38 Gm15595-201ENSMUST00000120840 961 ntBASIC16.38■□□□□ 0.21
Shank2Q80Z38 Mir1956-201ENSMUST00000157748 65 ntBASIC16.38■□□□□ 0.21
Shank2Q80Z38 Gm9785-201ENSMUST00000062642 1006 ntBASIC16.38■□□□□ 0.21
Shank2Q80Z38 Gm9873-201ENSMUST00000063891 1097 ntBASIC16.38■□□□□ 0.21
Shank2Q80Z38 Gm8325-201ENSMUST00000099086 453 ntBASIC16.38■□□□□ 0.21
Shank2Q80Z38 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.38■□□□□ 0.21
Shank2Q80Z38 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.38■□□□□ 0.21
Shank2Q80Z38 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shank2Q80Z38 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Shank2Q80Z38 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shank2Q80Z38 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shank2Q80Z38 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Shank2Q80Z38 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shank2Q80Z38 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shank2Q80Z38 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shank2Q80Z38 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Shank2Q80Z38 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shank2Q80Z38 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shank2Q80Z38 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Gm5863-201ENSMUST00000121760 1008 ntBASIC16.37■□□□□ 0.21
Shank2Q80Z38 Gm25545-201ENSMUST00000122673 323 ntBASIC16.37■□□□□ 0.21
Shank2Q80Z38 Gm22144-201ENSMUST00000157402 102 ntBASIC16.37■□□□□ 0.21
Shank2Q80Z38 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Gm3332-201ENSMUST00000189337 928 ntBASIC16.37■□□□□ 0.21
Shank2Q80Z38 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC16.37■□□□□ 0.21
Shank2Q80Z38 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Shank2Q80Z38 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Shank2Q80Z38 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Shank2Q80Z38 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank2Q80Z38 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.36■□□□□ 0.21
Shank2Q80Z38 Gm14724-201ENSMUST00000118400 537 ntBASIC16.36■□□□□ 0.21
Shank2Q80Z38 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC16.36■□□□□ 0.21
Shank2Q80Z38 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC16.36■□□□□ 0.21
Shank2Q80Z38 Gm43520-201ENSMUST00000197996 164 ntBASIC16.36■□□□□ 0.21
Shank2Q80Z38 Gm6867-201ENSMUST00000219165 425 ntBASIC16.36■□□□□ 0.21
Shank2Q80Z38 Gm807-202ENSMUST00000224929 408 ntBASIC16.36■□□□□ 0.21
Shank2Q80Z38 AC156501.1-201ENSMUST00000228219 270 ntBASIC16.36■□□□□ 0.21
Shank2Q80Z38 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank2Q80Z38 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank2Q80Z38 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank2Q80Z38 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Shank2Q80Z38 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Shank2Q80Z38 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.36■□□□□ 0.21
Shank2Q80Z38 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank2Q80Z38 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank2Q80Z38 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank2Q80Z38 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank2Q80Z38 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Shank2Q80Z38 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank2Q80Z38 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank2Q80Z38 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank2Q80Z38 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank2Q80Z38 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shank2Q80Z38 Gm15703-201ENSMUST00000120250 880 ntBASIC16.35■□□□□ 0.21
Shank2Q80Z38 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC16.35■□□□□ 0.21
Shank2Q80Z38 Cd63-ps-202ENSMUST00000154992 717 ntBASIC16.35■□□□□ 0.21
Shank2Q80Z38 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shank2Q80Z38 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC16.35■□□□□ 0.21
Shank2Q80Z38 Gm23771-201ENSMUST00000178702 110 ntBASIC16.35■□□□□ 0.21
Shank2Q80Z38 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Shank2Q80Z38 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Shank2Q80Z38 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC16.35■□□□□ 0.21
Shank2Q80Z38 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shank2Q80Z38 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC16.35■□□□□ 0.21
Shank2Q80Z38 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC16.35■□□□□ 0.21
Shank2Q80Z38 Gm17889-201ENSMUST00000198410 598 ntBASIC16.35■□□□□ 0.21
Shank2Q80Z38 Gm3793-201ENSMUST00000204973 672 ntBASIC16.35■□□□□ 0.21
Shank2Q80Z38 Gm5455-201ENSMUST00000058710 715 ntBASIC16.35■□□□□ 0.21
Shank2Q80Z38 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Shank2Q80Z38 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shank2Q80Z38 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Shank2Q80Z38 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shank2Q80Z38 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms