Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.52□□□□□ -0.72
Vma21Q78T54 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Vma21Q78T54 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Vma21Q78T54 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Vma21Q78T54 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.52□□□□□ -0.72
Vma21Q78T54 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Vma21Q78T54 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.52□□□□□ -0.72
Vma21Q78T54 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Vma21Q78T54 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.52□□□□□ -0.73
Vma21Q78T54 Gm6447-201ENSMUST00000118905 835 ntBASIC10.52□□□□□ -0.73
Vma21Q78T54 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.52□□□□□ -0.73
Vma21Q78T54 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.52□□□□□ -0.73
Vma21Q78T54 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.52□□□□□ -0.73
Vma21Q78T54 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.52□□□□□ -0.73
Vma21Q78T54 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.52□□□□□ -0.73
Vma21Q78T54 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.52□□□□□ -0.73
Vma21Q78T54 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.52□□□□□ -0.73
Vma21Q78T54 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Vma21Q78T54 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Vma21Q78T54 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.52□□□□□ -0.73
Vma21Q78T54 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.52□□□□□ -0.73
Vma21Q78T54 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Vma21Q78T54 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.52□□□□□ -0.73
Vma21Q78T54 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Vma21Q78T54 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Vma21Q78T54 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Vma21Q78T54 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.51□□□□□ -0.73
Vma21Q78T54 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.51□□□□□ -0.73
Vma21Q78T54 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Vma21Q78T54 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Gm12151-201ENSMUST00000121374 290 ntBASIC10.51□□□□□ -0.73
Vma21Q78T54 Gm14719-201ENSMUST00000121891 340 ntBASIC10.51□□□□□ -0.73
Vma21Q78T54 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.51□□□□□ -0.73
Vma21Q78T54 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.51□□□□□ -0.73
Vma21Q78T54 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.51□□□□□ -0.73
Vma21Q78T54 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.51□□□□□ -0.73
Vma21Q78T54 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.51□□□□□ -0.73
Vma21Q78T54 Gm44872-201ENSMUST00000207864 420 ntBASIC10.51□□□□□ -0.73
Vma21Q78T54 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.51□□□□□ -0.73
Vma21Q78T54 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Vma21Q78T54 Gm19220-201ENSMUST00000222682 803 ntBASIC10.51□□□□□ -0.73
Vma21Q78T54 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC10.51□□□□□ -0.73
Vma21Q78T54 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.51□□□□□ -0.73
Vma21Q78T54 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.51□□□□□ -0.73
Vma21Q78T54 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.51□□□□□ -0.73
Vma21Q78T54 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.51□□□□□ -0.73
Vma21Q78T54 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Vma21Q78T54 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Vma21Q78T54 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms