Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.91□□□□□ -0.66
Rif1Q6PR54 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Gm15711-201ENSMUST00000118889 535 ntBASIC10.9□□□□□ -0.66
Rif1Q6PR54 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Gm3809-201ENSMUST00000180973 1006 ntBASIC10.9□□□□□ -0.66
Rif1Q6PR54 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Gm28071-201ENSMUST00000190355 478 ntBASIC10.9□□□□□ -0.66
Rif1Q6PR54 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.9□□□□□ -0.66
Rif1Q6PR54 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.9□□□□□ -0.66
Rif1Q6PR54 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Gm23255-201ENSMUST00000102244 110 ntBASIC10.9□□□□□ -0.66
Rif1Q6PR54 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Gm17831-201ENSMUST00000205579 900 ntBASIC10.9□□□□□ -0.66
Rif1Q6PR54 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.9□□□□□ -0.66
Rif1Q6PR54 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.9□□□□□ -0.66
Rif1Q6PR54 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Gm21811-201ENSMUST00000096485 930 ntBASIC10.9□□□□□ -0.66
Rif1Q6PR54 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.9□□□□□ -0.66
Rif1Q6PR54 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Gm4081-201ENSMUST00000195287 1838 ntBASIC10.9□□□□□ -0.66
Rif1Q6PR54 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.9□□□□□ -0.66
Rif1Q6PR54 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Rif1Q6PR54 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC10.9□□□□□ -0.67
Rif1Q6PR54 Gm44616-201ENSMUST00000206417 1732 ntBASIC10.9□□□□□ -0.67
Rif1Q6PR54 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rif1Q6PR54 AC107763.1-201ENSMUST00000226082 1365 ntBASIC10.9□□□□□ -0.67
Rif1Q6PR54 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Rif1Q6PR54 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rif1Q6PR54 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.89□□□□□ -0.67
Rif1Q6PR54 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Gm14724-201ENSMUST00000118400 537 ntBASIC10.89□□□□□ -0.67
Rif1Q6PR54 Gm11578-201ENSMUST00000118530 459 ntBASIC10.89□□□□□ -0.67
Rif1Q6PR54 Gm9645-201ENSMUST00000197131 792 ntBASIC10.89□□□□□ -0.67
Rif1Q6PR54 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Gm6450-201ENSMUST00000200896 574 ntBASIC10.89□□□□□ -0.67
Rif1Q6PR54 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Gm29741-201ENSMUST00000192667 421 ntBASIC10.89□□□□□ -0.67
Rif1Q6PR54 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Gm18460-201ENSMUST00000208088 464 ntBASIC10.89□□□□□ -0.67
Rif1Q6PR54 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.89□□□□□ -0.67
Rif1Q6PR54 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.89□□□□□ -0.67
Rif1Q6PR54 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rif1Q6PR54 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms