Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scaf4Q6PFF0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scaf4Q6PFF0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Mir686-201ENSMUST00000102174 109 ntBASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Gm14701-201ENSMUST00000117156 348 ntBASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Gm2213-201ENSMUST00000197485 688 ntBASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms