Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc85bQ6PDY0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc85bQ6PDY0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc85bQ6PDY0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.48□□□□□ -0.25
Ccdc85bQ6PDY0 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc85bQ6PDY0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc85bQ6PDY0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc85bQ6PDY0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc85bQ6PDY0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc85bQ6PDY0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc85bQ6PDY0 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Gm17040-202ENSMUST00000170597 889 ntBASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Gm32025-201ENSMUST00000217960 307 ntBASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Gm8712-201ENSMUST00000221090 701 ntBASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc85bQ6PDY0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 Gm12266-201ENSMUST00000120311 962 ntBASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc85bQ6PDY0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc85bQ6PDY0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc85bQ6PDY0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc85bQ6PDY0 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.46□□□□□ -0.26
Ccdc85bQ6PDY0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc85bQ6PDY0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc85bQ6PDY0 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.46□□□□□ -0.26
Ccdc85bQ6PDY0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc85bQ6PDY0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc85bQ6PDY0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc85bQ6PDY0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc85bQ6PDY0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc85bQ6PDY0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc85bQ6PDY0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc85bQ6PDY0 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
Ccdc85bQ6PDY0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Ccdc85bQ6PDY0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc85bQ6PDY0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc85bQ6PDY0 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.45□□□□□ -0.26
Ccdc85bQ6PDY0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc85bQ6PDY0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.45□□□□□ -0.26
Ccdc85bQ6PDY0 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc85bQ6PDY0 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms