Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Gm26315-201ENSMUST00000083890 321 ntBASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Gm15321-201ENSMUST00000121290 288 ntBASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Gm5354-201ENSMUST00000182417 973 ntBASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Gm38223-201ENSMUST00000194484 695 ntBASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Smarcd3Q6P9Z1 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Gm6447-201ENSMUST00000118905 835 ntBASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms