Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Gm2231-201ENSMUST00000125661 612 ntBASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Olfr284-202ENSMUST00000206647 966 ntBASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Gm9368-201ENSMUST00000219348 831 ntBASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmgb4Q6P8W9 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Gm16479-201ENSMUST00000121706 932 ntBASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Gm7783-201ENSMUST00000204795 781 ntBASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Cts7-204ENSMUST00000225321 1257 ntBASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hmgb4Q6P8W9 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Gm26185-201ENSMUST00000157692 266 ntBASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Gm16379-201ENSMUST00000161469 348 ntBASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Gm29396-201ENSMUST00000185659 716 ntBASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Gm8762-201ENSMUST00000193486 339 ntBASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmgb4Q6P8W9 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms