Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smchd1Q6P5D8 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Gm13813-201ENSMUST00000120998 787 ntBASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Gm2546-201ENSMUST00000182630 991 ntBASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Gm29199-201ENSMUST00000187766 775 ntBASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Gm3786-201ENSMUST00000202659 378 ntBASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Smchd1Q6P5D8 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Smchd1Q6P5D8 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Smchd1Q6P5D8 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Smchd1Q6P5D8 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smchd1Q6P5D8 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smchd1Q6P5D8 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.08□□□□□ -0.15
Smchd1Q6P5D8 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smchd1Q6P5D8 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Smchd1Q6P5D8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Smchd1Q6P5D8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smchd1Q6P5D8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smchd1Q6P5D8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smchd1Q6P5D8 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smchd1Q6P5D8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smchd1Q6P5D8 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Gm31256-201ENSMUST00000194705 506 ntBASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smchd1Q6P5D8 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Mir3547-201ENSMUST00000175461 88 ntBASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Gm2383-201ENSMUST00000181461 807 ntBASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms