Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn9aQ62205 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn9aQ62205 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn9aQ62205 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn9aQ62205 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn9aQ62205 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Scn9aQ62205 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn9aQ62205 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn9aQ62205 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Scn9aQ62205 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Scn9aQ62205 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Scn9aQ62205 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn9aQ62205 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn9aQ62205 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn9aQ62205 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Scn9aQ62205 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Scn9aQ62205 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn9aQ62205 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn9aQ62205 Gm11989-201ENSMUST00000117240 672 ntBASIC14.91□□□□□ -0.02
Scn9aQ62205 Gm11362-201ENSMUST00000118838 850 ntBASIC14.91□□□□□ -0.02
Scn9aQ62205 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn9aQ62205 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC14.91□□□□□ -0.02
Scn9aQ62205 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.91□□□□□ -0.02
Scn9aQ62205 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn9aQ62205 AC174797.2-202ENSMUST00000225729 568 ntBASIC14.91□□□□□ -0.02
Scn9aQ62205 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC14.91□□□□□ -0.02
Scn9aQ62205 Snora73b-201ENSMUST00000083419 205 ntBASIC14.91□□□□□ -0.02
Scn9aQ62205 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.91□□□□□ -0.02
Scn9aQ62205 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC14.91□□□□□ -0.02
Scn9aQ62205 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn9aQ62205 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn9aQ62205 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.91□□□□□ -0.02
Scn9aQ62205 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn9aQ62205 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn9aQ62205 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
Scn9aQ62205 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn9aQ62205 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn9aQ62205 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn9aQ62205 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.91□□□□□ -0.02
Scn9aQ62205 Gm807-202ENSMUST00000224929 408 ntBASIC14.91□□□□□ -0.02
Scn9aQ62205 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC14.91□□□□□ -0.02
Scn9aQ62205 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.91□□□□□ -0.02
Scn9aQ62205 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn9aQ62205 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Scn9aQ62205 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn9aQ62205 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn9aQ62205 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn9aQ62205 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scn9aQ62205 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.9□□□□□ -0.02
Scn9aQ62205 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn9aQ62205 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Scn9aQ62205 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn9aQ62205 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scn9aQ62205 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scn9aQ62205 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn9aQ62205 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn9aQ62205 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn9aQ62205 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Scn9aQ62205 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Scn9aQ62205 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn9aQ62205 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn9aQ62205 Gm22133-201ENSMUST00000102082 109 ntBASIC14.9□□□□□ -0.02
Scn9aQ62205 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.9□□□□□ -0.02
Scn9aQ62205 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn9aQ62205 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Scn9aQ62205 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn9aQ62205 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.9□□□□□ -0.02
Scn9aQ62205 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.9□□□□□ -0.02
Scn9aQ62205 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Scn9aQ62205 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Scn9aQ62205 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn9aQ62205 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.9□□□□□ -0.02
Scn9aQ62205 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn9aQ62205 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Scn9aQ62205 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scn9aQ62205 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn9aQ62205 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Scn9aQ62205 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn9aQ62205 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn9aQ62205 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn9aQ62205 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Scn9aQ62205 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Scn9aQ62205 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn9aQ62205 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn9aQ62205 Gm5733-201ENSMUST00000190232 939 ntBASIC14.89□□□□□ -0.03
Scn9aQ62205 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Scn9aQ62205 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC14.89□□□□□ -0.03
Scn9aQ62205 Gm5455-201ENSMUST00000058710 715 ntBASIC14.89□□□□□ -0.03
Scn9aQ62205 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC14.89□□□□□ -0.03
Scn9aQ62205 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Scn9aQ62205 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Scn9aQ62205 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Scn9aQ62205 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn9aQ62205 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn9aQ62205 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn9aQ62205 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Scn9aQ62205 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn9aQ62205 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn9aQ62205 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn9aQ62205 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms