Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.23□□□□□ -0.13
Ecm1Q61508 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.23□□□□□ -0.13
Ecm1Q61508 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Ecm1Q61508 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.23□□□□□ -0.13
Ecm1Q61508 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ecm1Q61508 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.23□□□□□ -0.13
Ecm1Q61508 Gm45598-202ENSMUST00000210719 986 ntBASIC14.23□□□□□ -0.13
Ecm1Q61508 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 Gm10076-201ENSMUST00000073238 384 ntBASIC14.23□□□□□ -0.13
Ecm1Q61508 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
Ecm1Q61508 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.23□□□□□ -0.13
Ecm1Q61508 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ecm1Q61508 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.23□□□□□ -0.13
Ecm1Q61508 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ecm1Q61508 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ecm1Q61508 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ecm1Q61508 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ecm1Q61508 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Ecm1Q61508 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ecm1Q61508 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.22□□□□□ -0.13
Ecm1Q61508 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ecm1Q61508 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ecm1Q61508 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ecm1Q61508 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ecm1Q61508 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.22□□□□□ -0.13
Ecm1Q61508 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ecm1Q61508 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ecm1Q61508 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ecm1Q61508 Gm12314-201ENSMUST00000118104 538 ntBASIC14.22□□□□□ -0.13
Ecm1Q61508 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.22□□□□□ -0.13
Ecm1Q61508 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.22□□□□□ -0.13
Ecm1Q61508 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ecm1Q61508 Gm24514-201ENSMUST00000174961 285 ntBASIC14.22□□□□□ -0.13
Ecm1Q61508 Gm5523-201ENSMUST00000180415 997 ntBASIC14.22□□□□□ -0.13
Ecm1Q61508 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ecm1Q61508 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ecm1Q61508 Gm37666-201ENSMUST00000194110 866 ntBASIC14.22□□□□□ -0.13
Ecm1Q61508 Gm17812-201ENSMUST00000204935 318 ntBASIC14.22□□□□□ -0.13
Ecm1Q61508 Gm19187-201ENSMUST00000206781 892 ntBASIC14.22□□□□□ -0.13
Ecm1Q61508 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.22□□□□□ -0.13
Ecm1Q61508 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ecm1Q61508 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ecm1Q61508 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.22□□□□□ -0.13
Ecm1Q61508 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ecm1Q61508 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ecm1Q61508 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ecm1Q61508 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.22□□□□□ -0.13
Ecm1Q61508 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ecm1Q61508 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ecm1Q61508 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ecm1Q61508 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ecm1Q61508 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ecm1Q61508 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ecm1Q61508 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Ecm1Q61508 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ecm1Q61508 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ecm1Q61508 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ecm1Q61508 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ecm1Q61508 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ecm1Q61508 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ecm1Q61508 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ecm1Q61508 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ecm1Q61508 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ecm1Q61508 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ecm1Q61508 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ecm1Q61508 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ecm1Q61508 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ecm1Q61508 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ecm1Q61508 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.21□□□□□ -0.13
Ecm1Q61508 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ecm1Q61508 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ecm1Q61508 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ecm1Q61508 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.21□□□□□ -0.13
Ecm1Q61508 Gm11597-201ENSMUST00000121423 964 ntBASIC14.21□□□□□ -0.13
Ecm1Q61508 Gm17040-202ENSMUST00000170597 889 ntBASIC14.21□□□□□ -0.13
Ecm1Q61508 Gm20426-201ENSMUST00000173657 440 ntBASIC14.21□□□□□ -0.13
Ecm1Q61508 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.21□□□□□ -0.13
Ecm1Q61508 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.21□□□□□ -0.13
Ecm1Q61508 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ecm1Q61508 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ecm1Q61508 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ecm1Q61508 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ecm1Q61508 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ecm1Q61508 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ecm1Q61508 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ecm1Q61508 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ecm1Q61508 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ecm1Q61508 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ecm1Q61508 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ecm1Q61508 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ecm1Q61508 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ecm1Q61508 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms