Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ift88Q61371 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ift88Q61371 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ift88Q61371 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ift88Q61371 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ift88Q61371 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ift88Q61371 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.29□□□□□ -0.12
Ift88Q61371 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ift88Q61371 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ift88Q61371 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ift88Q61371 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ift88Q61371 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ift88Q61371 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ift88Q61371 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.29□□□□□ -0.12
Ift88Q61371 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ift88Q61371 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.29□□□□□ -0.12
Ift88Q61371 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.29□□□□□ -0.12
Ift88Q61371 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ift88Q61371 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.29□□□□□ -0.12
Ift88Q61371 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.29□□□□□ -0.12
Ift88Q61371 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ift88Q61371 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Ift88Q61371 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.29□□□□□ -0.12
Ift88Q61371 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.29□□□□□ -0.12
Ift88Q61371 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.29□□□□□ -0.12
Ift88Q61371 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.29□□□□□ -0.12
Ift88Q61371 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ift88Q61371 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ift88Q61371 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ift88Q61371 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.29□□□□□ -0.12
Ift88Q61371 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ift88Q61371 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ift88Q61371 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ift88Q61371 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ift88Q61371 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.29□□□□□ -0.12
Ift88Q61371 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ift88Q61371 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ift88Q61371 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ift88Q61371 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ift88Q61371 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ift88Q61371 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ift88Q61371 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ift88Q61371 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ift88Q61371 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ift88Q61371 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ift88Q61371 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ift88Q61371 Gm14350-201ENSMUST00000116642 640 ntBASIC14.28□□□□□ -0.12
Ift88Q61371 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ift88Q61371 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ift88Q61371 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ift88Q61371 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.28□□□□□ -0.12
Ift88Q61371 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.28□□□□□ -0.12
Ift88Q61371 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ift88Q61371 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.28□□□□□ -0.12
Ift88Q61371 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ift88Q61371 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ift88Q61371 Gm6983-201ENSMUST00000214912 628 ntBASIC14.28□□□□□ -0.12
Ift88Q61371 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.28□□□□□ -0.12
Ift88Q61371 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ift88Q61371 Itm2b-204ENSMUST00000228637 783 ntBASIC14.28□□□□□ -0.12
Ift88Q61371 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ift88Q61371 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ift88Q61371 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ift88Q61371 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ift88Q61371 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ift88Q61371 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ift88Q61371 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ift88Q61371 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ift88Q61371 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.28□□□□□ -0.12
Ift88Q61371 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ift88Q61371 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ift88Q61371 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ift88Q61371 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ift88Q61371 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.27□□□□□ -0.12
Ift88Q61371 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ift88Q61371 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ift88Q61371 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Ift88Q61371 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.27□□□□□ -0.12
Ift88Q61371 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ift88Q61371 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ift88Q61371 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ift88Q61371 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ift88Q61371 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.27□□□□□ -0.12
Ift88Q61371 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ift88Q61371 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ift88Q61371 Gm16202-201ENSMUST00000117532 544 ntBASIC14.27□□□□□ -0.13
Ift88Q61371 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ift88Q61371 Gm12341-201ENSMUST00000119724 503 ntBASIC14.27□□□□□ -0.13
Ift88Q61371 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ift88Q61371 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ift88Q61371 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.27□□□□□ -0.13
Ift88Q61371 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ift88Q61371 Gm44397-201ENSMUST00000195950 113 ntBASIC14.27□□□□□ -0.13
Ift88Q61371 Gm18307-201ENSMUST00000206864 949 ntBASIC14.27□□□□□ -0.13
Ift88Q61371 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ift88Q61371 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ift88Q61371 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ift88Q61371 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ift88Q61371 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ift88Q61371 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms