Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.2□□□□□ -0.46
Ripk1Q60855 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ripk1Q60855 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ripk1Q60855 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.2□□□□□ -0.46
Ripk1Q60855 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ripk1Q60855 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.2□□□□□ -0.46
Ripk1Q60855 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ripk1Q60855 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ripk1Q60855 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ripk1Q60855 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ripk1Q60855 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ripk1Q60855 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ripk1Q60855 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ripk1Q60855 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Ripk1Q60855 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Ripk1Q60855 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.19□□□□□ -0.46
Ripk1Q60855 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.19□□□□□ -0.46
Ripk1Q60855 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.19□□□□□ -0.46
Ripk1Q60855 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.19□□□□□ -0.46
Ripk1Q60855 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ripk1Q60855 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.19□□□□□ -0.46
Ripk1Q60855 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.19□□□□□ -0.46
Ripk1Q60855 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Ripk1Q60855 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ripk1Q60855 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ripk1Q60855 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ripk1Q60855 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ripk1Q60855 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ripk1Q60855 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.18□□□□□ -0.46
Ripk1Q60855 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ripk1Q60855 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ripk1Q60855 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Ripk1Q60855 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ripk1Q60855 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.18□□□□□ -0.46
Ripk1Q60855 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ripk1Q60855 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.18□□□□□ -0.46
Ripk1Q60855 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.18□□□□□ -0.46
Ripk1Q60855 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ripk1Q60855 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Ripk1Q60855 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Ripk1Q60855 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ripk1Q60855 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Ripk1Q60855 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ripk1Q60855 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ripk1Q60855 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ripk1Q60855 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ripk1Q60855 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ripk1Q60855 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ripk1Q60855 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 165.3 ms