Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col12a1Q60847 Gm10288-201ENSMUST00000084614 537 ntBASIC12.43□□□□□ -0.42
Col12a1Q60847 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.43□□□□□ -0.42
Col12a1Q60847 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col12a1Q60847 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col12a1Q60847 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col12a1Q60847 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Col12a1Q60847 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col12a1Q60847 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col12a1Q60847 Gm24891-201ENSMUST00000104391 136 ntBASIC12.42□□□□□ -0.42
Col12a1Q60847 Gm12857-201ENSMUST00000117678 592 ntBASIC12.42□□□□□ -0.42
Col12a1Q60847 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.42□□□□□ -0.42
Col12a1Q60847 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Col12a1Q60847 Gm8531-201ENSMUST00000188319 893 ntBASIC12.42□□□□□ -0.42
Col12a1Q60847 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Col12a1Q60847 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Col12a1Q60847 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col12a1Q60847 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.42□□□□□ -0.42
Col12a1Q60847 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col12a1Q60847 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col12a1Q60847 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col12a1Q60847 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col12a1Q60847 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Col12a1Q60847 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col12a1Q60847 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col12a1Q60847 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col12a1Q60847 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Col12a1Q60847 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col12a1Q60847 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col12a1Q60847 Gm8723-201ENSMUST00000166076 820 ntBASIC12.42□□□□□ -0.42
Col12a1Q60847 Gm8701-201ENSMUST00000169259 874 ntBASIC12.42□□□□□ -0.42
Col12a1Q60847 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col12a1Q60847 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.42□□□□□ -0.42
Col12a1Q60847 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col12a1Q60847 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col12a1Q60847 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col12a1Q60847 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col12a1Q60847 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.42□□□□□ -0.42
Col12a1Q60847 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.42□□□□□ -0.42
Col12a1Q60847 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.42□□□□□ -0.42
Col12a1Q60847 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.42□□□□□ -0.42
Col12a1Q60847 Gm15352-201ENSMUST00000118696 270 ntBASIC12.42□□□□□ -0.42
Col12a1Q60847 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC12.42□□□□□ -0.42
Col12a1Q60847 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col12a1Q60847 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.42□□□□□ -0.42
Col12a1Q60847 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.42□□□□□ -0.42
Col12a1Q60847 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Col12a1Q60847 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col12a1Q60847 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col12a1Q60847 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col12a1Q60847 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC12.41□□□□□ -0.42
Col12a1Q60847 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col12a1Q60847 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col12a1Q60847 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col12a1Q60847 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Col12a1Q60847 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col12a1Q60847 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col12a1Q60847 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col12a1Q60847 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.41□□□□□ -0.42
Col12a1Q60847 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col12a1Q60847 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC12.41□□□□□ -0.42
Col12a1Q60847 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.41□□□□□ -0.42
Col12a1Q60847 Gm21092-201ENSMUST00000178995 955 ntBASIC12.41□□□□□ -0.42
Col12a1Q60847 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col12a1Q60847 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col12a1Q60847 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col12a1Q60847 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.41□□□□□ -0.42
Col12a1Q60847 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col12a1Q60847 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col12a1Q60847 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.41□□□□□ -0.42
Col12a1Q60847 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col12a1Q60847 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.41□□□□□ -0.42
Col12a1Q60847 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col12a1Q60847 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col12a1Q60847 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col12a1Q60847 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.41□□□□□ -0.42
Col12a1Q60847 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Col12a1Q60847 Gm37852-201ENSMUST00000193027 350 ntBASIC12.41□□□□□ -0.42
Col12a1Q60847 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col12a1Q60847 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.41□□□□□ -0.42
Col12a1Q60847 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.4□□□□□ -0.42
Col12a1Q60847 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 Gm8737-201ENSMUST00000122208 642 ntBASIC12.4□□□□□ -0.42
Col12a1Q60847 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col12a1Q60847 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC12.4□□□□□ -0.42
Col12a1Q60847 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Col12a1Q60847 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms