Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav5d-4Q5R1F6 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5d-4Q5R1F6 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5d-4Q5R1F6 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5d-4Q5R1F6 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5d-4Q5R1F6 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5d-4Q5R1F6 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5d-4Q5R1F6 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5d-4Q5R1F6 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms