Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap2Q3V1H1 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap2Q3V1H1 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.81□□□□□ -0.04
Ckap2Q3V1H1 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap2Q3V1H1 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap2Q3V1H1 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap2Q3V1H1 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap2Q3V1H1 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ckap2Q3V1H1 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.81□□□□□ -0.04
Ckap2Q3V1H1 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap2Q3V1H1 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap2Q3V1H1 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap2Q3V1H1 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap2Q3V1H1 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap2Q3V1H1 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap2Q3V1H1 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.81□□□□□ -0.04
Ckap2Q3V1H1 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ckap2Q3V1H1 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap2Q3V1H1 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap2Q3V1H1 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap2Q3V1H1 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Gm15703-201ENSMUST00000120250 880 ntBASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Gm6222-202ENSMUST00000182143 629 ntBASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap2Q3V1H1 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap2Q3V1H1 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.78□□□□□ -0.04
Ckap2Q3V1H1 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.78□□□□□ -0.04
Ckap2Q3V1H1 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap2Q3V1H1 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.78□□□□□ -0.04
Ckap2Q3V1H1 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap2Q3V1H1 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap2Q3V1H1 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap2Q3V1H1 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ckap2Q3V1H1 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap2Q3V1H1 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap2Q3V1H1 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap2Q3V1H1 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms