Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cks1brtQ3UNC9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Gm3052-202ENSMUST00000188254 2224 ntBASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Gm6550-201ENSMUST00000187574 993 ntBASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Gm37714-201ENSMUST00000194742 342 ntBASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Gm45484-201ENSMUST00000210310 1141 ntBASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Gm5364-201ENSMUST00000216789 889 ntBASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Gm43273-201ENSMUST00000199649 2594 ntBASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cks1brtQ3UNC9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Gm13410-201ENSMUST00000117058 1415 ntBASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Daam2-202ENSMUST00000224595 1926 ntBASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Rgr-203ENSMUST00000225070 4704 ntBASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1brtQ3UNC9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms