Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.98□□□□□ -0.33
Usp30Q3UN04 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.98□□□□□ -0.33
Usp30Q3UN04 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.98□□□□□ -0.33
Usp30Q3UN04 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.98□□□□□ -0.33
Usp30Q3UN04 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.98□□□□□ -0.33
Usp30Q3UN04 Gm31256-201ENSMUST00000194705 506 ntBASIC12.98□□□□□ -0.33
Usp30Q3UN04 Gm38092-201ENSMUST00000195600 653 ntBASIC12.98□□□□□ -0.33
Usp30Q3UN04 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp30Q3UN04 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.97□□□□□ -0.33
Usp30Q3UN04 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 AC073947.1-201ENSMUST00000216991 649 ntBASIC12.97□□□□□ -0.33
Usp30Q3UN04 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.97□□□□□ -0.33
Usp30Q3UN04 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.97□□□□□ -0.33
Usp30Q3UN04 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.97□□□□□ -0.33
Usp30Q3UN04 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp30Q3UN04 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Usp30Q3UN04 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.96□□□□□ -0.33
Usp30Q3UN04 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Usp30Q3UN04 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Usp30Q3UN04 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Usp30Q3UN04 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp30Q3UN04 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp30Q3UN04 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Usp30Q3UN04 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Usp30Q3UN04 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp30Q3UN04 Daam2-202ENSMUST00000224595 1926 ntBASIC12.96□□□□□ -0.33
Usp30Q3UN04 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Usp30Q3UN04 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Usp30Q3UN04 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Usp30Q3UN04 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Usp30Q3UN04 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp30Q3UN04 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms