Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Gm11930-201ENSMUST00000117788 190 ntBASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Gm8908-201ENSMUST00000121633 1024 ntBASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Gm15547-201ENSMUST00000122152 333 ntBASIC15.35■□□□□ 0.05
Spg7Q3ULF4 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Spg7Q3ULF4 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 AC166095.1-201ENSMUST00000223731 1241 ntBASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.34■□□□□ 0.05
Spg7Q3ULF4 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.33■□□□□ 0.05
Spg7Q3ULF4 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Spg7Q3ULF4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Spg7Q3ULF4 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Spg7Q3ULF4 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Spg7Q3ULF4 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.33■□□□□ 0.04
Spg7Q3ULF4 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Spg7Q3ULF4 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Spg7Q3ULF4 Gm13736-201ENSMUST00000119272 253 ntBASIC15.33■□□□□ 0.04
Spg7Q3ULF4 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Spg7Q3ULF4 Gm15276-201ENSMUST00000145953 498 ntBASIC15.33■□□□□ 0.04
Spg7Q3ULF4 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Spg7Q3ULF4 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.33■□□□□ 0.04
Spg7Q3ULF4 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.33■□□□□ 0.04
Spg7Q3ULF4 AC126253.1-202ENSMUST00000226732 835 ntBASIC15.33■□□□□ 0.04
Spg7Q3ULF4 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.33■□□□□ 0.04
Spg7Q3ULF4 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Spg7Q3ULF4 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Spg7Q3ULF4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Spg7Q3ULF4 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Spg7Q3ULF4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Spg7Q3ULF4 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Spg7Q3ULF4 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Spg7Q3ULF4 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Spg7Q3ULF4 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Spg7Q3ULF4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Spg7Q3ULF4 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Spg7Q3ULF4 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.33■□□□□ 0.04
Spg7Q3ULF4 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Spg7Q3ULF4 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Spg7Q3ULF4 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Spg7Q3ULF4 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Spg7Q3ULF4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Spg7Q3ULF4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Spg7Q3ULF4 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms